Interpreting Genomic Variation: Fundamental Principles (FutureLearn)

Interpreting Genomic Variation: Fundamental Principles (FutureLearn)

Learn the principles and language of genomic variant interpretation and enhance your working knowledge of the ACMG guidelines. Discover the principles of genetic variant interpretation. Our individual genomes make us unique, and contribute to both rare and common disease. In genomic testing, it’s vital to distinguish the clinically relevant, disease-causing variant from its background normal genomic variation in order to safely manage patients.

Class Deals by MOOC List - Click here and see FutureLearn's Active Discounts, Deals, and Promo Codes.

Get variant interpretation training for effectively managing patients
This course is designed to educate health professionals involved in the variant journey from the laboratory to the patient.
You’ll explore the fundamental principles of variant interpretation and review the American College of Clinical Genetics and Genomic (ACMG) and The Association for Clinical Genomic Science (AGCS) guidelines. You will also take a detailed look at the tools available to aid genomic variant interpretation.

Study the ACMG and ACGS guidelines in theory and practice
The ACMG and ACGS guidelines were developed to promote consistency in the tools used to classify a genomic variant as pathogenic, likely pathogenic, likely benign, benign, or uncertain.
You’ll explore how the ACMG evaluated each of the tools and applied a weighting, as well as the algorithm developed to combine the evidence from each of these tools.
You’ll be encouraged to apply your learning through workshopped examples that illustrate both the strengths and weaknesses of the ACMG tools and framework.

Syllabus

Week 1: Introduction to genomic variation and population data
Week 2: Tools for genomic variant interpretation
Week 3: Clinical genomic variant interpretation

Learning on this course
You can take this self-guided course and learn at your own pace. On every step of the course you can meet other learners, share your ideas and join in with active discussions in the comments.
What will you achieve?
By the end of the course, you‘ll be able to...

  • Describe the different types of genomic variants and interpret the impact of different variant types in the context of normal background genomic variation
  • Apply the tools used in variant classification (including population databases, inheritance data, predictive data, functional data and phenotype) to interpret genomic variation
  • Apply the American College of Medical Genetics (ACMG) variant interpretation framework (including updates from the Association for Clinical Genomic Science (ACGS) to classify variants in rare disease genes and appraise the outputs.
  • Evaluate the value of the multidisciplinary team (MDT) approach in ensuring high-quality variant interpretation and patient care, and learn how to communicate efficiently in an MDT setting
  • Evaluate the strengths and weaknesses of each of the tools available for variant interpretation

Who is the course for?
This course is designed for all health professionals who require knowledge of the basic principles of variant interpretation and applying ACMG guidelines.
This may include: - genomic specialists leading on variant interpretation - clinical scientists - clinical geneticists - genomic counsellors
It will also be useful for genomic champions, eg the clinical specialist who will be attending multi-disciplinary genomic variant interpretation meetings and will need to understand the principles and language of genomic variant interpretation.

Go to Class
MOOC List is learner-supported. When you buy through links on our site, we may earn an affiliate commission.

Related Courses

The Genomics Era: the Future of Genetics in Medicine (FutureLearn) FutureLearn
St George's, University of London,St George's University Hospitals NHS Foundation Trust

The Genomics Era: the Future of Genetics in Medicine (FutureLearn)

Get an introduction to the growing role of genomics in healthcare, for patient diagnoses, treatment and disease prevention. This free online course will provide healthcare professionals with a basic grounding in genomic medicine. It will introduce you to new genomic technologies, which are revolutionising medicine and will, in time, provide the mainstay of patient diagnosis, treatment and disease prevention.

Self Paced
5-12 Weeks
Genomic Technologies in Clinical Diagnostics: Next Generation Sequencing (FutureLearn) FutureLearn
St George's, University of London

Genomic Technologies in Clinical Diagnostics: Next Generation Sequencing (FutureLearn)

Understand new and established genomic sequencing technologies, and how to apply them in clinical practice. Powerful new technologies have been driving forward immense and exciting changes in clinical practice. The days of peering down the microscope to detect chromosome abnormalities are gone, replaced by chromosome analysis at the genomic level.

Self Paced
2 Weeks
Introduction to Genomic Technologies (Coursera) Coursera
Johns Hopkins University

Introduction to Genomic Technologies (Coursera)

This course introduces you to the basic biology of modern genomics and the experimental tools that we use to measure it. We'll introduce the Central Dogma of Molecular Biology and cover how next-generation sequencing can be used to measure DNA, RNA, and epigenetic patterns. You'll also get an introduction to the key concepts in computing and data science that you'll need to understand how data from next-generation sequencing experiments are generated and analyzed.

Aug 17th 2026
4 Weeks
Genomics in the NHS: A Clinician's Guide to Genomic Testing for Rare Disease (FutureLearn) FutureLearn
St George's, University of London,Health Education England

Genomics in the NHS: A Clinician's Guide to Genomic Testing for Rare Disease (FutureLearn)

Explore the practicalities of genomic testing in the NHS, when to consider genomics, and the patient pathway for rare disease. Build your knowledge of the genomic testing pathway for rare disease. The widescale availability of genomic sequencing in the NHS brings new possibilities for patients but means new concepts, systems and processes for clinicians.

Oct 2nd 2023
2 Weeks
Bacterial Genomes: Comparative Genomics using Artemis Comparison Tool (ACT) (FutureLearn) FutureLearn
Wellcome Genome Campus Advanced Courses and Scientific Conferences

Bacterial Genomes: Comparative Genomics using Artemis Comparison Tool (ACT) (FutureLearn)

Learn to use comparative genomics to improve your knowledge of microbial genomes. Gain experience in using the Artemis Comparison Tool for comparative genomics. Disease outbreaks are still a big problem in our modern world. Comparison between two or more bacterial genomes can help improve understanding of the causes of pathogenicity and outbreaks of disease caused by bacteria.

No sessions available
3 Weeks
Pathogen Genomics: A New Era in Global Health Surveillance and Strategy (FutureLearn) FutureLearn
Wellcome Connecting Science,COG-Train

Pathogen Genomics: A New Era in Global Health Surveillance and Strategy (FutureLearn)

Learn how genomics can help contain infectious diseases, prevent future global health threats, and better protect public health. On this three-week course taught by experts in pathogen genomics and epidemiology, you’ll review recent developments in genomic surveillance, and explore how these could inform public health actions.

Mar 6th 2023
3 Weeks
Non-Invasive Prenatal Testing (NIPT): An Introduction for Healthcare Professionals (FutureLearn) FutureLearn
St George's, University of London

Non-Invasive Prenatal Testing (NIPT): An Introduction for Healthcare Professionals (FutureLearn)

Get broad insight into the key issues surrounding Non-Invasive Prenatal Testing with this course for healthcare professionals. Learn about the history, limitations, and ethical considerations of NIPT. Non-Invasive Prenatal Testing (NIPT) is a timely issue in the UK. Already available within the private healthcare system, this maternal blood test is set to be offered by England’s National Health Service (NHS) in 2019.

Self Paced
3 Weeks
MedTech: Exploring the Human Genome (FutureLearn) FutureLearn
University of Leeds

MedTech: Exploring the Human Genome (FutureLearn)

Discover how advances in the field of genomics are transforming healthcare with this online genomics course. Learn how genomics is changing the future of healthcare. Advances in genomics have opened up exciting new possibilities for healthcare. On this course, you’ll learn what genomics is, and how it can revolutionise patient care. You’ll learn how genomic testing works, and consider the regulatory and ethical issues that surround it.

Self Paced
2 Weeks
Bioinformatics for Biologists: Analysing and Interpreting Genomics Datasets (FutureLearn) FutureLearn
Wellcome Connecting Science

Bioinformatics for Biologists: Analysing and Interpreting Genomics Datasets (FutureLearn)

Boost your career by gaining the skills to install and modify the elements of a bioinformatics workflow to suit your needs. Gain practical data science skills. Bioinformatics is crucial in helping to understand large and complex sets of biological data. On this three-week course, you’ll develop your knowledge of bioinformatics and gain practical experience in scaling up analysis and working with large and complex datasets effectively.

Self Paced
3 Weeks
The Power of Genomics to Understand the COVID-19 Pandemic (FutureLearn) FutureLearn
Wellcome Connecting Science,COG-Train

The Power of Genomics to Understand the COVID-19 Pandemic (FutureLearn)

Gain insights into tracking, treating, preventing, and preparing for pandemics through genome sequencing and data sharing. See how viral genomics can improve the response to COVID-19 and future pandemics. Genomics is crucial in understanding and responding to pandemics, including COVID-19. On this three-week course, you’ll learn key concepts in viral genomics, how they can be applied to the COVID-19 pandemic, and how they can help us prepare for future pandemics.

Jul 4th 2022
3 Weeks
Cancer in the 21st Century: the Genomic Revolution (FutureLearn) FutureLearn
University of Glasgow

Cancer in the 21st Century: the Genomic Revolution (FutureLearn)

Discover how genetics is revolutionising the detection and treatment of cancer, with this free online course. Cancer Research UK estimates that 1 in 2 people in the UK will be diagnosed with cancer during their lifetime. It is a disease that impacts on most people’s lives at some stage. So understanding cancer, and the development of new treatments, is of intrinsic interest to us all.

No sessions available
5-12 Weeks